Publications

Previous work related to COVID-19 and stool studies, respectively.

  • Kwon JH, Nickel KB, Reske KA, Stwalley D, Dubberke ER, Lyons PG, Michelson A, McMullen K, Sahrmann JM, Gandra S, Olsen MA, Burnham JP. Risk factors for hospital-acquired infections during the SARS-CoV-2 pandemic. J Hosp Infect. 2022 Dec 6:S0195-6701(22)00375-9. doi: 10.1016/j.jhin.2022.11.020. Epub ahead of print. PMID: 36493966; PMCID: PMC9724556.
  • Dhar A, Ballman C, Roemmich BL, Dubberke ER, Farnsworth CW. Serological detection of antibodies to the SARS-CoV-2 nucleocapsid protein from dried blood spots. Clin Biochem. 2022 Oct;108:67-68. doi: 10.1016/j.clinbiochem.2022.06.012. Epub 2022 Jun 28. PMID: 35777486; PMCID: PMC9238023.
  • Ibrahim MM, Merzkani M, Murad H, Pande A, Flores K, Dubberke ER, Alhamad T. Kidney Transplantation from COVID-19 Deceased Donors: New Hope on the Horizon. Am J Nephrol. 2022;53(4):331-332. doi: 10.1159/000522597. Epub 2022 Mar 28. PMID: 35344961; PMCID: PMC9059032.
  • Gupta R, Gupta P, Wang Z, Seth A, Morrissey J, George I, Gandra S, Storch G, Parikh B, Genin G, Singamaneni S. Plasmon-enhanced Quantitative Lateral Flow Assay for Femtomolar Detection of SARS-CoV-2 Antibodies and Antigens. Res Sq [Preprint]. 2022 Feb 21:rs.3.rs-1258688. doi: 10.21203/rs.3.rs-1258688/v1. PMID: 35194598; PMCID: PMC8863156.
  • Wang Z, Morrissey JJ, Liu L, Wang Y, Zhou Q, Naik RR, Singamaneni S. Plasmonically Enhanced Ultrasensitive Epitope-Specific Serologic Assay for COVID-19. Anal Chem. 2022 Jan 18;94(2):909-917. doi: 10.1021/acs.analchem.1c03676. Epub 2021 Dec 22. PMID: 34935364; PMCID: PMC8782240.
  • Anthony WE, Wang B, Sukhum KV, et al. Acute and persistent effects of commonly used antibiotics on the gut microbiome and resistome in healthy adults. Cell Rep. 2022;39(2):110649. doi:10.1016/j.celrep.2022.110649.
  • Omosule CL, Conklin J, Seck S, et al. Qualitative and quantitative detection of SARS-CoV-2 antibodies from dried blood spots [published online ahead of print, 2022 Jan 3]. Clin Biochem. 2022;S0009-9120(21)00342-8. doi:10.1016/j.clinbiochem.2021.12.012.
  • Fishbein SR, Robinson JI, Hink T, Reske KA, Newcomer EP, Burnham CD, Henderson JP, Dubberke ER, Dantas G. Multi-omics investigation of Clostridioides difficile-colonized patients reveals pathogen and commensal correlates of C. difficile pathogenesis. Elife. 2022 Jan 27;11:e72801. doi: 10.7554/eLife.72801. PMID: 35083969; PMCID: PMC8794467.
  • Raju S., Anderson N.W., Robinson E., Squires C., Wallace M.A., Burnham C.D, and Parikh B.A. Comparison of Six SARS-CoV-2 Molecular Methods and Correlation with the Cycle Threshold Distribution in Clinical Specimens. J Appl Lab Med. 2021 Jul 20:jfab086.
  • Parikh, B.A. and Farnsworth W.C. Laboratory evaluation of SARS-CoV-2 in the COVID-19 pandemic. Best Pract Res Clin Rheumatol, 2021. 101660. doi: 10.1016/j.berh.2021.101660. PMID: 33518410.
  • Tahan S., Parikh B.A., Droit L, Wallace M., Burnham C.D., and Wang D. SARS-CoV-2 E gene variant alters analytical sensitivity characteristics of viral detection using a commercial RT-PCR assay. J. Clin. Microbiol. 2021. 59(7):e0007521. PMID: 33903167.
  • Wang Y, Wang Z, Gupta P, Morrissey JJ, Naik RR, Singamaneni S. Enhancing the Stability of COVID-19 Serological Assay through Metal-Organic Framework Encapsulation. Adv Healthc Mater. 2021 Sep;10(18):e2100410. doi: 10.1002/adhm.202100410. Epub 2021 Jul 23. PMID: 34297470; PMCID: PMC8427112.
  • Murad H, Dubberke E, Mattu M, Parikh B, Wellen J, Alhamad T. Repeat SARS-CoV-2 testing after recovery. Is a pretransplant PCR necessary?. Am J Transplant. 2021;21(9):3206-3207. doi:10.1111/ajt.16506.
  • Langdon A, Schwartz DJ, Bulow C, Sun X, Hink T, Reske KA, Jones C, Burnham CD, Dubberke ER, Dantas G; CDC Prevention Epicenter Program. Microbiota restoration reduces antibiotic-resistant bacteria gut colonization in patients with recurrent Clostridioides difficile infection from the open-label PUNCH CD study. Genome Med. 2021 Feb 16;13(1):28. doi: 10.1186/s13073-021-00843-9. PMID: 33593430; PMCID: PMC7888090.
  • Smith B, Janowski A, Danis J, Harvey I, Zhao H, Dai Y, Farnsworth C, Gronowski A, Roper S, Fremont D, and Wang D. “Seroprevalence of SARS-CoV-2 antibodies in children and adults in St. Louis, Missouri” mSphere 2021 2021 Feb 3;6(1):e01207-20.